Journal of Cancer Research and Treatment
ISSN (Print): 2374-1996 ISSN (Online): 2374-2003 Website: https://www.sciepub.com/journal/jcrt Editor-in-chief: Jean Rommelaere
Open Access
Journal Browser
Go
Journal of Cancer Research and Treatment. 2020, 8(1), 1-6
DOI: 10.12691/jcrt-8-1-1
Open AccessArticle

Rapid Screening of Blood Mitochondrial D310 and D315 Mutations in Breast Cancer Patients

Ferdowsi Akter1, SM Hasan Israfil2, Mohammad Shawkat Ali3, A. S. Shamsur Rouf4, Mohammad Sahajadul Alam5, Mohammad Shafiqur Rahman6 and Gazi Nurun Nahar Sultana7,

1Department of Pharmacy, East West University, Dhaka, Bangladesh

2Department of Pharmacy, State University of Bangladesh, Dhaka, Bangladesh

3Department of Clinical Pharmacy and Pharmacology, University of Dhaka, Dhaka, Bangladesh

4Department of Pharmaceutical Technology, University of Dhaka, Dhaka, Bangladesh

5Department of Surgical Oncology, National Institute of Cancer Research and Hospital, Dhaka, Bangladesh

6Institute of Statistical Research and Training, University of Dhaka, Dhaka, Bangladesh

7Centre for Advanced Research in Sciences, University of Dhaka, Dhaka, Bangladesh

Pub. Date: May 17, 2020

Cite this paper:
Ferdowsi Akter, SM Hasan Israfil, Mohammad Shawkat Ali, A. S. Shamsur Rouf, Mohammad Sahajadul Alam, Mohammad Shafiqur Rahman and Gazi Nurun Nahar Sultana. Rapid Screening of Blood Mitochondrial D310 and D315 Mutations in Breast Cancer Patients. Journal of Cancer Research and Treatment. 2020; 8(1):1-6. doi: 10.12691/jcrt-8-1-1

Abstract

Aims: 'Poly C' stretch extending from 303 to 315 nucleotide positions known as (D310) by GeneBank within the non-coding region HVR-II of mitochondrial DNA (mtDNA) has been identified as a mutational hotspot of primary cancer. We aimed to find this mutation in Bangladeshi breast cancer patients and control samples for screening the changes in poly C stretches. Materials and Methods: We have analyzed a total of 98 breast cancer blood samples and 98 healthy control blood samples and extracted DNA from blood samples for direct sequencing using ABI®3130 Genetic Analyzer. Results: We observed 70.41% C insertion at 310 regions (P<0.001, OR = 16.30 and 95% CI=7.83-33.93) in breast cancer patient whereas it is present only in 12.24% healthy individuals. No alterations were observed in 29.59% breast cancer samples. We also check the mutation pattern at D315 regions, but no significant observation was found (P=1.00). Conclusions: This is the first study from Bangladeshi breast cancer (BC) patients indicating a relatively high frequency of D310 mutations, which suggests that mtDNA instability at D310 may be a common characteristic of BC, study also supports the hypothesis that mtDNA D310 screening may represent additional blood based biomarker for breast cancer prognosis.

Keywords:
mtDNA D310 Poly C stretch breast cancer

Creative CommonsThis work is licensed under a Creative Commons Attribution 4.0 International License. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/

References:

[1]  Tazhibi, M., Feizi. A. Awareness Levels about Breast Cancer Risk Factors, Early Warning Signs, and Screening and Therapeutic Approaches among Iranian Adult Women: A large Population Based Study Using Latent Class Analysis. Biomed Res Int. 306352:1-9. Sep. 2014.
 
[2]  WHO (2019) Breast cancer: prevention and control. [Online] Available: www.who.int/cancer/detection/breastcancer/en/, [Accessed Aug 28, 2019].
 
[3]  Sultana, G.N.N., Rahman. A., Hossain. C.F., et al. Mitochondrial DNA Mutations- A Candidate Biomarkers for Breast Cancer Detection in Bangladesh. Chin J Cancer, 31 (9): 449-454. Sep.2012.
 
[4]  Hussain, S.A., Sullivan, R. Cancer Control in Bangladesh. Jpn J Clin Oncol, 43 (12): 1159-1169. Oct.2013.
 
[5]  Kirches E. MtDNA As a Cancer Marker: A Finally Closed Chapter? Curr Genomics 18 (3): 255-267. Jun. 2017.
 
[6]  Greim H, Albertini RJ. The Cellular Response to the Genotoxic Insult: The Question of Threshold for Genotoxic Carcinogens. Royal Society of Chemistry, UK, Cambridge, 2012, 1-20.
 
[7]  Fliss, M.S., Usadel, H., Caballero, O.L., et al. Facile detection of mitochondrial DNA mutations in tumors and bodily fluids. Science. 287 (5460): 2017-2019. Mar.2000.
 
[8]  Jones, J.B., Song, J.J., Hempen, P.M., et al. Detection of mitochondrial DNA mutations in pancreatic cancer offers a “mass”-ive advantage over detection of nuclear DNA mutations. Cancer Res 61: 1299-1304. 2001.
 
[9]  Liu, V.W., Shi, H.H., Cheung, A.N., et al. High incidence of somatic mitochondrial DNA mutations in human ovarian carcinomas. Cancer Res, 61(16): 5998-6001. Aug.2001.
 
[10]  Parrella, P., Xiao, Y., Fliss, M., et al. Detection of mitochondrial DNA mutations in primary breast cancer and fine-needle aspirates. Cancer Res, 61(20): 7623-7626. Oct. 2001.
 
[11]  Wang, C., Youle, R.J. The Role of Mitochondria in Apoptosis. Annu Rev Genet, 43: 95-118. 2009.
 
[12]  Santos, R.X., Correia. S.C., Zhu, X., et al. Mitochondrial DNA Oxidative Damage and Repair in. Aging and Alzheimer’s Disease. Antioxid Redox Signal, 18 (18): 2444-2457. Jun.2013.
 
[13]  Kim, H-R., Won, S.J., Fabian, C, et al. Mitochondrial DNA Aberrations and Pathophysiological Implications in Hematopoietic Diseases. Ann Lab Med, 35 (1): 1-14. Dec. 2014.
 
[14]  Sanchez-Cespedes, M., Parrella, P., Nomoto, S., et al. Identification of a mononucleotide repeat as a major target for mitochondrial DNA alterations in human tumors. Cancer Res. 61(19): 7015-7019. Oct.2001.
 
[15]  Sultana, G.N.N., Rahman, A., Karim, M., et al. Breast Cancer Associated mitochondrial NADH-dehydrogenase subunit-3 (ND3) polymorphisms *G10398A and T10400C) in Bangladeshi women. J. Med. Genet. Genomics, 3 (8): 131-135. 2011.
 
[16]  Tanaka, M., TakeyasuT., Fuku N, et al. Mitochondrial genome single nucleotide polymorphisms and their phenotypes in the Japanese. Ann N Y Acad Sci. 1011: 7-20. Apr.2004.
 
[17]  Krystek, Jr. SR., Metzler William J., Novotny J. Hydrophobicity Profiles for Protein Sequence Analysis. CurrProtoc Protein Sci 2.2: 1-13. 1995.
 
[18]  Sheskin, DJ. Handbook of parametric and nonparametric statistical procedures. Chapman & Hall/CRC, USA, 2004, New York, 221-239.
 
[19]  Ha, P.K., Tong, B.C., Westra, W.H., et al. Mitochondrial C-tract alteration in premalignant lesions of the head and neck: a marker for progression and clonal proliferation. Clin Cancer Res. 8 (7): 2260-5. Jul.2002.
 
[20]  Modica-Napolitano, J.S., Singh, K. Mitochondria as targets for detection and treatment of cancer. Expert Rev Mol Med 4(9): 1-19. Apr.2002.
 
[21]  Josephine, S. Modica-Napolitano, Mariola Kulawiec, et al. Mitochondria and Human Cancer.Current Molecular Medicine, 7(1): 121-131. Mar.2007.
 
[22]  Tseng, L-M., Yin, P-H., Chi, C-W., et al. Mitochondrial DNA mutations and mitochondrial DNA depletion in breast cancer. Genes Chromosomes Cancer, 45(7): 629-638. Jul.2005.
 
[23]  Fliss. M.S., Usadel, H., Caballero, O.L., et al. Facile detection of mitochondrial DNA mutations in tumors and bodily fluids. Science 287(5460): 2017-2019. Mar.2000.
 
[24]  Hertweck, K.L., Dasgupta, S. The Landscape of mtDNA Modifications in Cancer: A Tale of Two Cities. Front Oncol 7: 262. Nov. 2017.
 
[25]  Avagliano, A., Ruocco, M.R., Aliotta, F., et al. Mitochondrial Flexibility of Breast Cancers: A Growth Advantage and a Therapeutic Opportunity. Cells 8(5): 401. Apr.2019.
 
[26]  Xu C, Tran-Thanh D, Ma C, et al. (2012) Mitochondrial D310 mutations in the early development of breast cancer. Br J Cancer 106(9):1506. Apr.2012.
 
[27]  Alhomidi, M.A., Vedicherla, B., Movva, S. Mitochondrial D310 instability in Asian Indian breast cancer patients. Tumour Biol 34(4): 2427-2432. Aug. 2013.
 
[28]  Polyak, K., Li, Y., Zhu, H., et al. Somatic mutations of the mitochondrial genome in human colorectal tumours. Nat Genet 20(3):291-293. Nov. 1998.
 
[29]  Darvishi, K., Sharma, S., Bhat, A.K., et al. Mitochondrial DNA G10398A polymorphism imparts maternal Haplogroup N a risk for breast and esophageal cancer. Cancer Lett 249(2): 249-255. Nov.2007.
 
[30]  Richard, S.M., Bailliet, G., Páez, G.L., et al. Nuclear and mitochondrial genome instability in human breast cancer. Cancer Res 60(15): 4231-7. Aug. 2000.
 
[31]  Fei, X., Wu, J., Kong, Z., et al. Urban-Rural disparity of breast cancer and socioeconomic risk factors in China. PLoS One 10 (2): e0117572. Feb. 2015.
 
[32]  Kumle, M., Weiderpass, E., Braaten, T., et al. Use of Oral Contraceptives and Breast Cancer Risk. Cancer Epidemiol Biomarkers Prev 11(11): 1375-1381. Nov.2002.
 
[33]  Covarrubias, D., Bai, R-K., Wong, L-JC., et al. Mitochondrial DNA variant interactions modify breast cancer risk. J Hum Genet 53(10): 924-928. Aug. 2008.