| [1] | Ite, A. E., U. J. Ibok, M. U. Ite, and S. W. Petters, “Petroleum Exploration and Production: Past and Present Environmental Issues in the Nigeria's Niger Delta,” American Journal of Environmental Protection, 1 (4). 78-90, 2013. |
| |
| [2] | Ite, A. E., and K. T. Semple, “14 Biodegradation of petroleum hydrocarbons in contaminated soils,” Microbial Biotechnology: Energy and Environment, R. Arora, ed., pp. 250-278: CAB International, 2012. |
| |
| [3] | Ambrosoli, R., L. Petruzzelli, J. Luis Minati, and F. Ajmone Marsan, “Anaerobic PAH degradation in soil by a mixed bacterial consortium under denitrifying conditions,” Chemosphere, 60 (9). 1231-1236, 2005. |
| |
| [4] | Mahro, B., G. Schaefer, and M. Kästner, “Pathways of Microbial Degradation of Polycyclic Aromatic Hydrocarbons in Soil,” Bioremediation of chlorinated and polycyclic aromatic hydrocarbon compounds, R. E. Hinchee, ed., pp. 203-217: CRC Press, 1994. |
| |
| [5] | Simarro, R., N. González, L. Bautista, R. Sanz, and M. Molina, “Optimisation of Key Abiotic Factors of PAH (Naphthalene, Phenanthrene and Anthracene) Biodegradation Process by a Bacterial Consortium,” Water, Air, & Soil Pollution, 217 (1). 365-374, 2011. |
| |
| [6] | Semple, K. T., J. Stokes, and B. J. Reid, “Temporal chances in the bioavailability of PAHs in soils,” Bioremediation Technologies for Polycyclic Aromatic Hydrocarbon Compounds247-252, 1999. |
| |
| [7] | Cerniglia, C. E., “Biodegradation of polycyclic aromatic hydrocarbons,” Current Opinion in Biotechnology, 4 (3). 331-338, 1993. |
| |
| [8] | Smith, M. J., G. Lethbridge, and R. G. Burns, “Bioavailability and biodegradation of polycyclic aromatic hydrocarbons in soils,” FEMS Microbiology Letters, 152 (1). 141-147, 1997. |
| |
| [9] | Reilley, K. A., M. K. Banks, and A. P. Schwab, “Dissipation of polycyclic aromatic hydrocarbons in the rhizosphere,” Journal of Environmental Quality, 25 (2). 212-219, 1996. |
| |
| [10] | Johnson, D. L., D. R. Anderson, and S. P. McGrath, “Soil microbial response during the phytoremediation of a PAH contaminated soil,” Soil Biology and Biochemistry, 37 (12). 2334-2336, 2005. |
| |
| [11] | Couling, N. R., M. G. Towell, and K. T. Semple, “Biodegradation of PAHs in soil: Influence of chemical structure, concentration and multiple amendment,” Environmental Pollution, 158 (11). 3411-3420, 2010. |
| |
| [12] | Macleod, C. J. A., and K. T. Semple, “The influence of single and multiple applications of pyrene on the evolution of pyrene catabolism in soil,” Environmental Pollution, 139 (3). 455-460, 2006. |
| |
| [13] | Macleod, C. J., and K. T. Semple, “The adaptation of two similar soils to pyrene catabolism,” Environmental Pollution, 119 (3). 357-364, 2002. |
| |
| [14] | Wei, X. Y., L. Z. Sang, J. N. Chen, Y. X. Zhu, and Y. Zhang, “The effects of LMWOAs on biodegradation of multi-component PAHs in aqueous solution using dual-wavelength fluorimetry,” Environmental Pollution, 157 (11). 3150-3157, 2009. |
| |
| [15] | Harayama, S., “Polycyclic aromatic hydrocarbon bioremediation design,” Current Opinion in Biotechnology, 8 (3). 268-273, 1997. |
| |
| [16] | MacLeod, C. J. A., and K. T. Semple, “Influence of Contact Time on Extractability and Degradation of Pyrene in Soils,” Environmental Science & Technology, 34 (23). 4952-4957, 2000. |
| |
| [17] | Azaizeh, H., P. M. L. Castro, and P. Kidd, “Biodegradation of Organic Xenobiotic Pollutants in the Rhizosphere “ Organic Xenobiotics and Plants: From Mode of Action to Ecophysiology, Plant Ecophysiology P. Schröder and C. D. Collins, eds., pp. 191-215: Springer Netherlands, 2011. |
| |
| [18] | Crowley, D. E., E. Luepromechai, and A. Singer, “Metabolism of Xenobiotics in the Rhizosphere,” Pesticide Biotransformation in Plants and Microorganisms: similarities and divergences, ACS Symposium Series 777, J. C. Hall, R. E. Hoagland and R. M. Zablotowicz, eds., pp. 333-352: American Chemical Society, 2000. |
| |
| [19] | Suresh, B., and G. A. Ravishankar, “Phytoremediation - a novel and promising approach for environmental clean-up,” Critical Reviews in Biotechnology, 24 (2-3). 97-124, 2004. |
| |
| [20] | Chaudhry, Q., M. Blom-Zandstra, S. Gupta, and E. J. Joner, “Utilising the synergy between plants and rhizosphere microorganisms to enhance breakdown of organic pollutants in the environment,” Environmental Science and Pollution Research, 12 (1). 34-48, 2005. |
| |
| [21] | Ite, A. E., N. F. Hanney, and K. T. Semple, “The Effect of Hydroxycinnamic Acids on the Microbial Mineralisation of Phenanthrene in Soil,” International Journal of Environmental Bioremediation & Biodegradation, 3 (2). 40-47, 2015. |
| |
| [22] | Fester, T., J. Giebler, L. Y. Wick, D. Schlosser, and M. Kästner, “Plant–microbe interactions as drivers of ecosystem functions relevant for the biodegradation of organic contaminants,” Current Opinion in Biotechnology, 27 (0). 168-175, 2014. |
| |
| [23] | Binet, P., J. M. Portal, and C. Leyval, “Dissipation of 3-6-ring polycyclic aromatic hydrocarbons in the rhizosphere of ryegrass,” Soil Biology & Biochemistry, 32 (14). 2011-2017, 2000. |
| |
| [24] | Yoshitomi, K. J., and J. R. Shann, “Corn (Zea mays L.) root exudates and their impact on 14C-pyrene mineralization,” Soil Biology and Biochemistry, 33 (12–13). 1769-1776, 2001. |
| |
| [25] | Shann, J. R., and J. J. Boyle, “Influence of Plant Species on In Situ Rhizosphere Degradation,” Bioremediation through Rhizosphere Technology, ACS Symposium Series T. A. Anderson and J. R. Coats, eds., pp. 70-81, Washington DC: American Chemical Society, 1994. |
| |
| [26] | Fletcher, J. S., and R. S. Hegde, “Release of phenols by perennial plant roots and their potential importance in bioremediation,” Chemosphere, 31 (4). 3009-3016, 1995. |
| |
| [27] | Gilbert, E. S., and D. E. Crowley, “Plant compounds that induce polychlorinated biphenyl biodegradation by Arthrobacter sp. strain B1B,” Applied and Environmental Microbiology, 63 (5). 1933-1938, 1997. |
| |
| [28] | Focht, D. D., “Strategies for the improvement of aerobic metabolism of polychlorinated biphenyls,” Current Opinion in Biotechnology, 6 (3). 341-346, 1995. |
| |
| [29] | Badri, D. V., V. M. Loyola-Vargas, C. D. Broeckling, and J. M. Vivanco, “Root Secretion of Phytochemicals in Arabidopsis Is Predominantly Not Influenced by Diurnal Rhythms,” Molecular Plant, 3 (3). 491-498, 2010. |
| |
| [30] | Badri, D. V., and J. M. Vivanco, “Regulation and function of root exudates,” Plant, Cell & Environment, 32 (6). 666-681, 2009. |
| |
| [31] | Narasimhan, K., C. Basheer, V. B. Bajic, and S. Swarup, “Enhancement of plant-microbe interactions using a rhizosphere metabolomics-driven approach and its application in the removal of polychlorinated biphenyls,” Plant Physiology, 132 (1). 146-153, 2003. |
| |
| [32] | Aoki, T., T. Akashi, and S.-i. Ayabe, “Flavonoids of Leguminous Plants: Structure, Biological Activity, and Biosynthesis,” Journal of Plant Research, 113 (4). 475-488, 2000. |
| |
| [33] | Cesco, S., G. Neumann, N. Tomasi, R. Pinton, and L. Weisskopf, “Release of plant-borne flavonoids into the rhizosphere and their role in plant nutrition,” Plant and Soil, 329 (1). 1-25, 2010. |
| |
| [34] | Azimova, S. S., and V. I. Vinogradova, Natural Compounds: Flavonoids: Springer New York, 2012. |
| |
| [35] | Hassan, S., and U. Mathesius, “The role of flavonoids in root–rhizosphere signalling: opportunities and challenges for improving plant–microbe interactions,” Journal of Experimental Botany, 2012. |
| |
| [36] | Phillips, D. A., and S. M. Tsai, “Flavonoids as plant signals to rhizosphere microbes,” Mycorrhiza, 1 (2). 55-58, 1992. |
| |
| [37] | Shaw, L. J., and J. E. Hooker, “The fate and toxicity of the flavonoids naringenin and formononetin in soil,” Soil Biology and Biochemistry, 40 (2). 528-536, 2008. |
| |
| [38] | Rao, J. R., and J. E. Cooper, “Rhizobia catabolize nod gene-inducing flavonoids via C-ring fission mechanisms,” Journal of Bacteriology, 176 (17). 5409-5413, 1994. |
| |
| [39] | Shaw, L. J., P. Morris, and J. E. Hooker, “Perception and modification of plant flavonoid signals by rhizosphere microorganisms,” Environmental Microbiology, 8 (11). 1867-1880, 2006. |
| |
| [40] | Rowell, D. L., Soil science : methods and applications, Harlow, Essex; New York: Longman Scientific & Technical ; Wiley, 1994. |
| |
| [41] | Doick, K. J., P. H. Lee, and K. T. Semple, “Assessment of spiking procedures for the introduction of a phenanthrene-LNAPL mixture into field-wet soil,” Environmental Pollution, 126 (3). 399-406, 2003. |
| |
| [42] | Reid, B. J., C. J. MacLeod, P. H. Lee, A. W. Morriss, J. D. Stokes, and K. T. Semple, “A simple 14C-respirometric method for assessing microbial catabolic potential and contaminant bioavailability,” FEMS Microbiology Letters, 196 (2). 141-146, 2001. |
| |
| [43] | Macleod, C. J. A., and K. T. Semple, “The adaptation of two similar soils to pyrene catabolism,” Environmental Pollution, 119 (3). 357-364, 2002. |
| |
| [44] | Lorch, H. J., G. Benckieser, and J. C. G. Ottow, “Basic methods for counting microorganisms in soil and water,” Methods in Applied Soil Microbiology and Biochemistry, K. Alef and P. Nannipieri, eds., pp. 146-161, New York: Academic Press, 1995. |
| |
| [45] | Nam, J. J., G. O. Thomas, F. M. Jaward, E. Steinnes, O. Gustafsson, and K. C. Jones, “PAHs in background soils from Western Europe: Influence of atmospheric deposition and soil organic matter,” Chemosphere, 70 (9). 1596-1602, 2008. |
| |
| [46] | Lee, P. H., K. J. Doick, and K. T. Semple, “The development of phenanthrene catabolism in soil amended with transformer oil,” FEMS Microbiology Letters, 228 (2). 217-223, 2003. |
| |
| [47] | Grosser, R. J., D. Warshawsky, and J. R. Vestal, “Indigenous and enhanced mineralization of pyrene, benzo[a]pyrene, and carbazole in soils,” Applied and Environmental Microbiology, 57 (12). 3462-3469, 1991. |
| |
| [48] | Grosser, R. J., J. R. Vestal, and D. Warshawsky, “Mineralization of polycyclic and N-heterocyclic aromatic compounds in hydrocarbon-contaminated soils,” Environmental Toxicology and Chemistry, 14 (3). 375-382, 1995. |
| |
| [49] | Bais, H. P., T. L. Weir, L. G. Perry, S. Gilroy, and J. M. Vivanco, “The role of root exudates in rhizosphere interactions with plants and other organisms,” Annual Review of Plant Biology, 57 (1). 233-266, 2006. |
| |
| [50] | Singer, A. C., D. Smith, W. A. Jury, K. Hathuc, and D. E. Crowley, “Impact of the plant rhizosphere and augmentation on remediation of polychlorinated biphenyl contaminated soil,” Environmental Toxicology and Chemistry, 22 (9). 1998-2004, 2003. |
| |
| [51] | Siciliano, S. D., and J. J. Germida, “Biolog analysis and fatty acid methyl ester profiles indicate that pseudomonad inoculants that promote phytoremediation alter the root-associated microbial community of Bromus biebersteinii,” Soil Biology and Biochemistry, 30 (13). 1717-1723, 1998. |
| |
| [52] | Shaw, L. J., and R. G. Burns, “Enhanced mineralization of [U-(14)C]2,4-dichlorophenoxyacetic acid in soil from the rhizosphere of Trifolium pratense,” Applied and Environmental Microbiology, 70 (8). 4766-4774, 2004. |
| |
| [53] | Parke, D., D. A. D'Argenio, and L. N. Ornston, “Bacteria Are Not What They Eat: That Is Why They Are So Diverse,” Journal of Bacteriology, 182 (2). 257-263, 2000. |
| |
| [54] | Kim, S. J., O. Kweon, R. C. Jones, R. D. Edmondson, and C. E. Cerniglia, “Genomic analysis of polycyclic aromatic hydrocarbon degradation in Mycobacterium vanbaalenii PYR-1,” Biodegradation, 19 (6). 859-881, 2008. |
| |
| [55] | Da Silva, M. L. B., R. Kamath, and P. J. J. Alvarez, “Effect of simulated rhizodeposition on the relative abundance of polynuclear aromatic hydrocarbon catabolic genes in a contaminated soil,” Environmental Toxicology and Chemistry, 25 (2). 386-391, 2006. |
| |
| [56] | Leigh, M. B., J. S. Fletcher, X. Fu, and F. J. Schmitz, “Root turnover: an important source of microbial substrates in rhizosphere remediation of recalcitrant contaminants,” Environmental Science & Technology, 36 (7). 1579-1583, 2002. |
| |
| [57] | Toal, M. E., C. Yeomans, K. Killham, and A. A. Meharg, “A review of rhizosphere carbon flow modelling,” Plant and Soil, 222 (1). 263-281, 2000. |
| |
| [58] | Shaw, Beaton, Glover, Killham, and Meharg, “Development and characterization of a lux-modified 2,4-dichlorophenol-degrading Burkholderia sp. RASC,” Environmental Microbiology, 1 (5). 393-399, 1999. |
| |
| [59] | Eagleson, M., Concise Encyclopedia of Chemistry, Berlin; New York: Walter de Gruyter, 1994. |
| |
| [60] | Santos, J. P., M. E. D. Zaniquelli, W. F. De Giovani, and S. E. Galembeck, “Aluminum ion complex formation with 3-hydroxyflavone in Langmuir and Langmuir–Blodgett films,” Colloids and Surfaces A: Physicochemical and Engineering Aspects, 198–200 (0). 569-576, 2002. |
| |
| [61] | O'Neil, M. J., The Merck Index: An Encyclopedia of Chemicals, Drugs, and Biologicals Whitehouse Station, NJ, USA: Chapman Hall Electronic Publishing Division, 2001. |
| |
| [62] | Qiu, X., B. E. Reed, and R. C. Viadero, “Effects of Flavonoids on 14C[7,10]-Benzo[a]pyrene Degradation in Root Zone Soil,” Environmental Engineering Science, 21 (5). 637-646, 2004. |
| |
| [63] | Makoi, J., and P. A. Ndakidemi, “Biological, ecological and agronomic significance of plant phenolic compounds in rhizosphere of the symbiotic legumes,” African Journal of Biotechnology, 6 (12). 1358-1368, 2007. |
| |
| [64] | Cushnie, T. P. T., and A. J. Lamb, “Recent advances in understanding the antibacterial properties of flavonoids,” International Journal of Antimicrobial Agents, 38 (2). 99-107, 2011. |
| |
| [65] | Jia, Z., B. Zou, X. Wang, J. Qiu, H. Ma, Z. Gou, S. Song, and H. Dong, “Quercetin-induced H2O2 mediates the pathogen resistance against Pseudomonas syringae pv. Tomato DC3000 in Arabidopsis thaliana,” Biochemical and Biophysical Research Communications, 396 (2). 522-527, 2010. |
| |
| [66] | Rhodes, A. H., S. M. Owen, and K. T. Semple, “Biodegradation of 2,4-dichlorophenol in the presence of volatile organic compounds in soils under different vegetation types,” FEMS Microbiology Letters, 269 (2). 323-330, 2007. |
| |