American Journal of Microbiological Research
ISSN (Print): 2328-4129 ISSN (Online): 2328-4137 Website: https://www.sciepub.com/journal/ajmr Editor-in-chief: Apply for this position
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American Journal of Microbiological Research. 2017, 5(6), 142-147
DOI: 10.12691/ajmr-5-6-5
Open AccessArticle

Mycobacterial Interspersed Repetitive Unit-variable Number Tandem Repeat (MIRU-VNTR) Typing Lacks Discriminatory Power in the Genetic Analysis of Bovine Tuberculosis in Egypt

Hebatallah Ahmed Mahgoub1, , Mohamed F. Salama2, Mohamed El-Adl2, Ahmed Ammar3, Ali Amer4, Samar Atwa5, Youssef Alseady6, Walaa Awadin1 and Emad Mokhtar4

1Pathology Department, Faculty of Veterinary Medicine, Mansoura University, Egypt

2Department of Biochemistry and Chemistry of Nutrition, Faculty of Veterinary Medicine, Mansoura University, Egypt

3Department of Bacteriology, Mycology and Immunology, Faculty of Veterinary Medicine, Zagazig University, Egypt

4Tuberculosis Department, Animal Health Research Centre, Egypt

5Department of Internal Medicine, Infectious and Fish Diseases, Faculty of Veterinary Medicine, Mansoura University, Egypt

6Physiology Department, Faculty of Veterinary Medicine, Mansoura University, Egypt

Pub. Date: December 26, 2017

Cite this paper:
Hebatallah Ahmed Mahgoub, Mohamed F. Salama, Mohamed El-Adl, Ahmed Ammar, Ali Amer, Samar Atwa, Youssef Alseady, Walaa Awadin and Emad Mokhtar. Mycobacterial Interspersed Repetitive Unit-variable Number Tandem Repeat (MIRU-VNTR) Typing Lacks Discriminatory Power in the Genetic Analysis of Bovine Tuberculosis in Egypt. American Journal of Microbiological Research. 2017; 5(6):142-147. doi: 10.12691/ajmr-5-6-5

Abstract

Tuberculosis (TB) is one of the most important infectious zoonotic diseases of vertebrates worldwide. TB in animals is primarily known from cases in cattle and other bovids for which the disease is generally referred to as bovine TB. The major causative agent of bovine TB is Mycobacterium bovis (M. bovis), a member of the Mycobacterium tuberculosis complex. Animal TB is a disease of high economic relevance within the context of livestock farming as it directly affects animal productivity and also influences international trade of animal products. In this study, we aimed at mycobacterial interspersed repetitive unit-variable number tandem repeat (MIRU-VNTR) analysis of cases of TB infection in local cattle in Egypt. Therefore, various samples (milk and blood samples) were collected from cattle farms (in Damietta Province) that were positive for tuberculin test. Mycobacterial isolation was tested on milk samples, but it showed negative result. DNA was extracted from blood samples. Five mycobacterial genes (IS6110, katG, gyrA, oxyR, pncA) were used for further confirmation of field TB infection. All blood samples were positive for Mycobacterial-specific genes. Twelve MIRU-VNTR loci were used to test their discriminatory power in the genetic analysis of TB, but such MIRU-VNTR loci typing failed to show any discriminatory power for the genetic analysis of bovine TB cases.

Keywords:
bovine tuberculosis MIRU-VNTR typing tuberculin test

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References:

[1]  Michel, A.L., Muller, B., van Helden, P.D. Mycobacterium bovis at the animal-human interface: a problem, or not? Vet Microbiol 2010; 140(3-4): 371-81.
 
[2]  Coscolla, M., Gagneux, S. Consequences of genomic diversity in Mycobacterium tuberculosis. Semin Immunol 2014; 26(6):431-44.
 
[3]  Ramos, D.F., Tavares, L., da Silva, P.E., Dellagostin, O.A. Molecular typing of Mycobacterium bovis isolates: a review. Braz J Microbiol 2014; 45(2):365-72.
 
[4]  Skuce, R.A., McCorry, T.P., McCarroll, J.F., Roring, S.M., Scott, A.N., Brittain, D., et al. Discrimination of Mycobacterium tuberculosis complex bacteria using novel VNTR-PCR targets. Microbiology 2002; 148(Pt 2): 519-28.
 
[5]  Supply, P., Allix, C., Lesjean, S., Cardoso-Oelemann, M., Rusch-Gerdes, S., Willery, E., et al. Proposal for standardization of optimized mycobacterial interspersed repetitive unit-variable-number tandem repeat typing of Mycobacterium tuberculosis. J Clin Microbiol 2006; 44(12):4498-510.
 
[6]  Jeon, B., Je, S., Park, J., Kim, Y., Lee, E.G., Lee, H., et al. Variable number tandem repeat analysis of Mycobacterium bovis isolates from Gyeonggi-do, Korea. J Vet Sci 2008; 9(2):145-53.
 
[7]  Carvalho, R.C., Vasconcellos, S.E., Issa Mde, A., Soares Filho, P.M., Mota, P.M., Araujo, F.R., et al. Molecular Typing of Mycobacterium bovis from Cattle Reared in Midwest Brazil. PloS one 2016; 11(9):e0162459.
 
[8]  Le Fleche, P., Fabre, M., Denoeud, F., Koeck, J.L., Vergnaud, G. High resolution, on-line identification of strains from the Mycobacterium tuberculosis complex based on tandem repeat typing. BMC Microbiol 2002; 2:37.
 
[9]  Smittipat, N., Billamas, P., Palittapongarnpim, M., Thong-On, A., Temu, M.M., Thanakijcharoen, P., et al. Polymorphism of variable-number tandem repeats at multiple loci in Mycobacterium tuberculosis. J Clin Microbiol 2005; 43(10):5034-43.
 
[10]  Roring, S., Scott, A., Brittain, D., Walker, I., Hewinson, G., Neill, S., et al. Development of variable-number tandem repeat typing of Mycobacterium bovis: comparison of results with those obtained by using existing exact tandem repeats and spoligotyping. J Clin Microbiol 2002; 40(6):2126-33.
 
[11]  Price-Carter, M., Rooker, S., Collins, D.M. Comparison of 45 variable number tandem repeat (VNTR) and two direct repeat (DR) assays to restriction endonuclease analysis for typing isolates of Mycobacterium bovis. Vet Microbiol 2011; 150(1-2):107-14.
 
[12]  Marks, J. Ending the routine guinea-pig test. Tubercle 1972; 53(1):31-4.
 
[13]  Zink, A.R., Nerlich, A.G. Molecular strain identification of the Mycobacterium tuberculosis complex in archival tissue samples. J Clin Pathol 2004; 57(11):1185-92.
 
[14]  Selander, R.K., Caugant, D.A., Ochman, H., Musser, J.M., Gilmour, M.N., Whittam, T.S. Methods of multilocus enzyme electrophoresis for bacterial population genetics and systematics. Appl Environ Microbiol 1986; 51(5):873-84.
 
[15]  Prado, R.B., Nangoti, H., Mendonca, L.J.P., Chi, K.D. Isolation of Mycobacterium spp. in milk from cows suspected or positive to tuberculosis. Braz J Vet Res An Sci 2001; 38(6):284-7.