[1] | Harakeh, S., Yassine, H., Gharios, M., Barbour, E., Hajjar, S., El-Fadel, M., Toufeili, I. and Tannous, R., “Isolation, molecular characterization and antimicrobial resistance patterns of Salmonella and Escherichia coli isolates from meat-based fast food in Lebanon”. Sci Total Environ 134. 33-44. 2005. |
|
[2] | Nettleman, M.D.,“Shiga toxin: E. coli O104:H4”. 2011. |
|
[3] | Selander, R.K., Musser, J.M., Caugant, D.A., Gilmour, M.N., and Whittam, T.S. “Population genetics of pathogenic bacteria”. Microbial Path 3. 1-7. 1987. |
|
[4] | Nataro, J.P. and Kaper, J.B., “Diarrhoeagenic Escherichia coli”.Clin Microbiol Rev11. 142-201. 1998. |
|
[5] | Karmali, M. A., “Infection by verotoxin-producing Escherichia coli”. Clin Microbiol Rev 2. 15-38. 1989. |
|
[6] | Wieler, L. H., Ilieff, A., Herbst, W., Bauer, C., Vieler, E., Bauerfeind, R., et al “Prevalence of enteropathogens in suckling and weaned piglets with diarrhoea in southern Germany”. J Vet Med B48. 151-159. 2001. |
|
[7] | Frank, C., Faber, M.S., Askar, M., Bernard, H., Fruth, A., Gilsdorf, A., Hohle, M., Karch, H., Krause, G., Prager, R., Spode, A., Stark, K. and Werber, D., “HUS investigation team. Large and ongoing outbreak of haemolytic uraemic syndrome, Germany, May 2011”. Euro Surveill16(21).19878. 2011. |
|
[8] | Bielaszewska, M., Mellmann, A., Zhang, W., Kock, R., Fruth, A., Bauwens, A., Peters, G. and Karch, H., “Characterisation of the Escherichia coli strain associated with an outbreak of haemolytic uraemic syndrome in Germany, 2011: a microbiological study”. Lancet Infect Dis 11. 671-676. 2011. |
|
[9] | Page, A.V. and Liles, W.C., “Enterohaemorrhagic Escherichia coli infections and the Haemolytic-Uraemic Syndrome”. Med Clin North Am 97(4). 681-695. 2013. |
|
[10] | Karmali, M.A., Mascarenhas,M., Shen, S., Ziebell, K., Johnson, S., Reid-Smith, R., Isaac-Renton, J., Clark, C., Rahn, K. and Kaper, J.B., “Association of genomic O island 122 of Escherichia coli EDL 933 with verocytotoxin-producing Escherichia coli seropathotypes that are linked to epidemic and/or serious disease. J Clin Microbiol 41. 4930-4940. 2003. |
|
[11] | ] Franz, E. and van Bruggen, A.H., “Ecology of E. coli O157:H7 and Salmonella enterica in the primary vegetable production chain. Crit Rev Microbiol 34. 143-161. 2008. |
|
[12] | Fremaux, B., Prigent-Combaret, C. and Vernozy-Rozand, C., “Long-term survival of Shiga toxin-producing Escherichia coli in cattle effluents and environment: an updated review”. Vet Microbiol 132 1-18. 2008. |
|
[13] | Berger, C.N., Sodha, S.V., Shaw, R.K., Griffin, P.M., Pink, D., Hand, P. and Frankel, G., “Fresh fruit and vegetables as vehicles for the transmission of human pathogens”. Environ Microbiol 12. 2385-2397. 2010. |
|
[14] | Bugarel, M., Beutin, L., Martin, A., Gill, A. and Fach, P., “Micro-array for the identification of Shiga toxin-producing Escherichia coli (STEC) seropathotypes associated with Haemorrhagic Colitis and Haemolytic Uremic Syndrome in humans”. Int J Food Microbiol 142. 318-329. 2010. |
|
[15] | Capriole, A., Morabito, S., Brugereb, H. and Oswald, E., “Enterohaemorrhagic Escherichia coli: emerging issues on virulence and modes of transmission”. Vet Res 36. 289-311. 2005. |
|
[16] | Mohammed, M.A.M., “Molecular characterization of diarrheagenic Escherichia coli isolated from meat products sold at Monsoura city, Egypt”. Food Cont 25. 159-164. 2012. |
|
[17] | Rangel, J.M., Sparling, P.H., Crowe, C., Griffin, P.M. and Swerdlow, D.L, “Epidemiology of Escherichia coli O157:H7 outbreaks, United States, 1982-2002”. Emerg Infect Dis 11. 603-609. 2005. |
|
[18] | Erickson, M.C. and Doyle, M.P., “Food as a vehicle for transmission of Shiga toxin- producing Escherichia coli”. Food Protect 70. 2426-2449. 2007. |
|
[19] | Miko, A., Delannoy, S., Fach, P., Strockbine, N.A., Lindstedt, B.A., Mariani-Kurkdjian, P., Reetz, J. and Beutin, L., “Genotypes and virulence characteristics of Shiga toxin-producing Escherichia coli O104 strains from different origins and sources”. Int J Med Microbiol 303(8). 410-421. 2013 |
|
[20] | Scharlach, M., Diercke, M., Dreesman, J., Jahn, N., Krieck, M., Beyrer, K., Claußen, K., Pulz, M. and Floride, R., “Epidemiological analysis of a cluster within the outbreak of Shiga toxin-producing Escherichia coli serotype O104:H4 in Northern Germany, 2011”. Int J Hyg Environ Health 216(3). 341-345. 2013. |
|
[21] | Soon, J.M., Seaman, P. and Baines, R.N., “Escherichia coliO104:H4 outbreak from sprouted seeds”. Int J Hyg Environ Health 216(3). 346-354. 2013. |
|
[22] | Cramer, J.P., “Enterohaemorrhagic Escherichia coli (EHEC): Haemorrhagic Colitis and Haemolytic Uraemic Syndrome (HUS). Emerg Infect Dis 213-227. 2014. |
|
[23] | Rhoades, J.R., Duffy, G. and Koutsoumanis, K., “Prevalence and concentration of verocytotoxigenic Escherichia coli, Salmonella enterica and Listeria monocytogenes in the beef production chain: a review”. Food Microbiol 26. 357-376. 2009. |
|
[24] | Karmali, M.A., Gannon, V. and Sargeant, J.M., “Verocytotoxin-producing Escherichia coli (VTEC)”. Vet Microbiol 140. 360-370. 2010. |
|
[25] | Browning, N.G., Botha, J.R., Sacho, H. and Moore, P.J., “Escherichiacoli O157:H7 haemorrhagic colitis. Report of the first South African case”. South Afr J Surg 28(1). 28-29. 1990. |
|
[26] | Müller, E.E., Ehlers, M.M. and Grabow, W.O.K., “The occurrence of E. coli O157:H7 in Southern African water sources intended for direct and indirect human consumption”. Water Res 35. 3085-3088. 2001. |
|
[27] | Müller, E.E., Taylor, M.B., Grabow, W.O.K. and Ehlers, M.M., “Isolation and characterisation of Escherichia coli O157:H7 and shiga toxin-converting bacteriophages from strains of human, bovine and porcine origin”. Water Sup 2(3). 29-38. 2002. |
|
[28] | Müller, E.E., Grabow, W.O.K. and Ehlers, M,M., “Immunomagnetic separation of Escherichiacoli O157:H7 from environmental and wastewater in South Africa”. Water SA 29(4). 427-432. 2003. |
|
[29] | Müller, E.E. and Ehlers, M.M., “Biolog identification of non-sorbitol fermenting bacteria isolated on E. coli O157 selective CT-SMAC agar”. Water SA 31(2). 247-251. 2005. |
|
[30] | Ateba, C.N., Mbewe, M. and Bezuidenhout, C.C., “The Prevalence of Escherichia coli O157 strains in cattle, pigs and humans in the North-West Province, South Africa”. SAJS 104. 78. 2008. |
|
[31] | Ateba, C.N. and Bezuidenhout, C.C., “Characterization of Escherichia coli O157 strains from humans, cattle and pigs in the North-WestProvince, South Africa”. Int J Food Microbiol, 128. 181-188. 2008. |
|
[32] | Momba, M.N.B., Abongo, B.O. and Mwambakana, J.N., “Prevalence of enterohaemorrhagic Escherichia coli O157:H7 in drinking water and its predicted impact on diarrhoeic HIV/AIDS patients in the Amathole District, Eastern Cape Province, South Africa”. Water SA 34 (3). 365-372.2008. |
|
[33] | Ateba, C.N. and Mbewe, M.,“Detection of Escherichia coli O157:H7 virulence genes in isolates from beef, pork, water, human and animal species in the North-West Province, South Africa: public health implications”. Res Microbiol162. 240-248. 2011. |
|
[34] | Ateba, C.N. and Mbewe, M.,“Determination of the genetic similarities of fingerprints from Escherichia coli O157:H7 isolated from different sources in the North West Province, South Africa using ISR, BOXAIR and REP-PCR analysis”. Microbiol Res168. 438-446. 2013. |
|
[35] | European Centre for Disease Prevention and Control and European Food Safety Authority, 2011. Shiga toxin/verotoxin-producing Escherichia coli in humans, food and animals in the EU/EEA, with special reference to the German outbreak strain STEC O104. Stockholm: ECDC. Available from: |
|
[36] | http://ecdc.europa.eu/en/publications/Publications/1106_TER_EColi_joint_EFSA.pdf. |
|
[37] | Askar, M., Faber, M.S., Frank, C., Bernard, H., Gilsdorf, A., Fruth, A., Prager, R., Hohle, M., Suess, T., Wadl, M., Krause, G., Stark, K. and Werber, D., “Update onthe ongoing outbreak of haemolytic uraemic syndrome due to Shiga toxinproducing Escherichia coli (STEC) serotype O104, Germany, May 2011”. Euro Surveill 16(22). 19883. 2011. |
|
[38] | Brzuszkiewicz, E., Thürmer, A., Schuldes, J., Leimbach, A., Liesegang, H., Meyer, F.D., Boelter, J., Petersen, H., Gottschalk, G. and Daniel, R.,“Genome sequence analyses of two isolates from the recent Escherichia coli outbreak in Germany reveal the emergence of a new pathotype: Entero-Aggregative- Haemorrhagic Escherichia coli (EAHEC)”. Arch Microbiol 193. 883-91. 2011. |
|
[39] | Frank, C., Werber, D., Cramer, JP et al.“Epidermic profile of Shiga-toxin-producing Escherichia coli O104:H4 outbreak in Germany- preliminary report”. N Engl J Med. 2011. |
|
[40] | Kett, D.H., Quartin, A.A., Mangino, J.E., Zervos, M.J., Ramirez, J.A. and IMPACT – HAP study groups. Escherichia coli O104:H4 South – West France. 2011. |
|
[41] | Mellmann, A., Harmsen, D., Cummings, C.A., Zentz, E.B., Leopold, S.R., Rico, A., Prior, K., Szczepanowski, R., Ji, Y., Zhang, W., McLaughlin, S.F., Henkhaus, J.K., Leopold, B., Bielaszewska, M., Prager, R., Brzoska, P.M., Moore, R.L., Guenther, S., Rothberg, J.M. and Karch, H.,“Prospective genomic characterization of the German enterohemorrhagic Escherichiacoli O104:H4 outbreak by rapid next generation sequencing technology”. PLoS One 6(7).e22751.2011. |
|
[42] | Borgatta, B., Kmet-Lunaˇcekb, N. and Relloc,J., E. coli O104:H4 outbreak and haemolytic uraemic syndrome”. Med Inten36(8). 576-583. 2012. |
|
[43] | Goodridge, L.D., LeJeune, J.T. and Beutin, L., “What was the source of the 2011outbreak of Escherichia coli in Germany and France?”.Case Studies Food Safety Authenticity 43-53. 2012. |
|
[44] | Cruishank, R., Duguid, J.P., Marmain, B.P. and Swain, R.H., Medical Microbiology, 12th Edition, New York. Longman Group Limited 2: 34. 1975. |
|
[45] | Forbes, A.B. and Weissfeld, A.S., Bailey and Scott’s Diagnostic Microbiology, 10th Edition. Mosby, St. Louis, MO.1998. |
|
[46] | Kiiyukia, C., Venkateswaran, K., Navarro, I.M., Nakano, H., Kawakami, H. and Hashimoto, H., “Seasonal distribution of Vibrio parahaemolyticus serotypes along the oyster beds in Hiroshima coast” J Fac Appl Biol Sci, Hiroshima Univ. 28. 49-61. 1989. |
|
[47] | Tunung, R., Chai, L.C., Usha, M.R., Lee, H.Y., Fatimah, A.B., Farinazleen, A.B. and Son, R., “Characterization of Salmonella enterica isolated from street food and clinical samples in Malaysia”. ASIAN Food J 14. 161-173.2007. |
|
[48] | Bugarel, M., Beutin, L., Martin, A., Gill, A. and Fach, P.,“Micro-array for the identification of Shiga toxin-producing Escherichia coli (STEC) seropathotypes associated with Hemorrhagic Colitis and Hemolytic Uremic Syndrome in humans”. Int J Food Microbiol 142. 318-329. 2010. |
|
[49] | Sambrook, J., Fritsch, E.F. and Maniatis, T.’ Molecular Cloning, A Laboratory Manual. 2nd Ed. New York: Cold Spring Harbour Laboratory Press. 1989. |
|
[50] | Newell, D.G., Koopmans, M., Verhoef, L., Duizer, E., Aidara-Kane, A., Sprong, H., Opsteegh, M., Langelaar, M., Threfall, J., Scheutz,F., der Giessen, J.V. and Kruse, H., “Foodborne diseases - the challenges of 20 years ago still persist while new ones continue toemerge”. IntJ Food Microbiol 139. 3-15. 2010. |
|
[51] | Hussein, H.S., “Prevalence and pathogenicity of Shiga toxin-producing Escherichia coli in beef cattle and their products”. J Ani Sci 85. 63-72. 2007. |
|
[52] | Karch, H., Tarr, P.I. and Bielaszewska, M., 2005. Enterohaemorrhagic Escherichia coliin human medicine. Int J Med Microbiol 295, 405-418. |
|
[53] | Fach, P., Perelle, S., Dilasser, F. and Grout, J., « Comparison between a PCR-ELISA test and the Vero cell assay for detecting Shiga toxin-producing Escherichia coli in dairy products and characterization of virulence traits of the isolated strains”. J Appl Microbiol 90. 809-818. 2001. |
|
[54] | Auvray, F., Lecureuil, C., Tache, J., Leclerc, V., Deperrois, V. and Lombard, B., “Detection, isolation and characterization of Shiga toxin-producing Escherichia coli in retailminced beef using PCR-based techniques, immunoassays and colony hybridization”. Lett ApplMicrobiol 45. 646-651. 2007. |
|
[55] | Beutin, L., Miko, A., Krause, G., Pries, K., Haby, S., Steege, K. and Albrecht, N., “Identification of human-pathogenic strains of Shiga toxin-producing Escherichiacoli from food by a combination of serotyping and molecular typing of Shiga toxin genes”. Appl Environ Microbiol 73. 4769-4775. 2007. |
|
[56] | Madic, J., Lecureuil, C., Dilasser, F., Derzelle, S., Jamet, E., Fach, P. and Auvray, F., «Screening of food raw materials for the presence of Shiga toxin-producing Escherichia coli O91:H21. Lett Appl Microbiol 48. 447-451. 2009. |
|
[57] | Fratamico, P.M., Bagi, L.K., Cray, W.C., Narang, N., Yan, X., Medina, M. and Liu, Y., “Detection by multiplex real-time polymerase chain reaction assays and isolation of Shiga toxin-producing Escherichia coli serogroups O26, O45, O103, O111, O121, and O145 in ground beef”. Foodborne Path Dis 8. 601-607. 2011. |
|
[58] | Madic, J., Vingadassalon, N., de Garam, C.P., Marault, M., Scheutz, F., Brugere, H., Jamet, E. and Auvray, F., “Detection of Shiga toxin-producing Escherichia coli serotypes O26: H11, O103:H2, O111:H8, O145:H28, and O157:H7 in raw-milk cheeses by using multiplex real-time PCR”. Appl Environ Microbiol 77. 2035-2041. 2011. |
|
[59] | Scheutz, F., Teel, L.D., Beutin, L., Piérard, D., Buvens, G., Karch, H., Mellmann, A., Caprioli, A., Tozzoli, R., Morabito, S., Strockbine, N.A., Melton-Celsa, A.R., Sanchez, M., Persson, S. and O'Brien, A.D.,“Multicenter evaluation of a sequence-based protocol for subtyping Shiga toxins and standardizing Stx nomenclature”. J Clin Microbiol50. 2951-63. 2012. |
|
[60] | Maruzumi, M., Morita, M., Matsouka, Y., Uekawa, A., Nakamura, T. and Fugi, K., « Mass food poisoning caused by beef offalcontaminated by Escherichia coli O157”. Jap J Infect Dis 58. 397. 2005. |
|
[61] | Auvray, F., Dilasser, F., Bibbal, D., Kérourédan, M., Oswald, E. and Brugère H., “French cattle is not a reservoir of the highly virulent enteroaggregative Shiga toxin-producing Escherichia coli of serotype O104:H4”. Vet Microbiol 158. 443-445. 2012. |
|
[62] | Elder, R.O., Keen, J.E., Siragusa, G.R., Barkocy-Gallagher, G.A., Koohmaraie, M. and Laegried, W.W., “Correlation of enterohaemorrhagic Escherichia coli O157 prevalence in faeces, hides and carcasses of beef cattle during processing”. Proc Nat Acad Sci 97. 2999-3003. 2000. |
|
[63] | Islam, M.S., Mahmud, Z.H., Gope, P.S., Zaman, R.U., Hossain, Z., Islam, M.S., Mondal, D., Sharker, M.A.Y., Islam, K., Jahan, H., Bhuiya, A., Endtz, H.P., Cravioto, A., Curtis, V., Tour, O., and Cairncross, S., “Hygiene intervention reduces contamination of weaning food in Bangladesh”. Trop Med Int Health 18(3). 250-258. 2013. |
|